HTLV1 Target gene Detail Information

> PALM2AKAP2 Gene Search Result


Gene Information
Gene Name PALM2AKAP2
Gene ID 445815
Gene Full Name PALM2 and AKAP2 fusion
Gene Alias AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PALM2-AKAP2|PRKA2
Transcripts ENSG00000157654
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8IXS6, Q9Y2D5
HGNC ID HGNC:33529
OMIM ID 604582
Summary This gene belongs to the paralemmin downstream gene (PDG) family defined in PMID:22855693. Paralemmin downstream genes may have evolved contiguously with the paralemmin genes and are associated with other paralemmin paralogs in humans and several other taxa. The gene encodes three distinct protein isoforms, the PALM2 isoform, the AKAP2 isoform and the PALM2-AKAP2 isoform. The biological significance of the PALM2-AKAP2 isoforms is yet unknown. Earlier, PALM2 and AKAP2 were annotated as separate genes and PALM2-AKAP2 was annotated as a readthrough gene. [provided by RefSeq, May 2019]
Target gene [PALM2AKAP2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001500 chr9 276 108 31 415 View
6003871 chr9 134 0 4 138 View
6010617 chr9 17 13 0 30 View
6029374 chr9 1 0 0 1 View

Target gene [PALM2AKAP2] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PALM2AKAP2 peak across samples

Peak Plot