HBV Target gene Detail Information

> PANTR1 Gene Search Result


Gene Information
Gene Name PANTR1
Gene ID 100506421
Gene Full Name POU3F3 adjacent non-coding transcript 1
Gene Alias LINC01114|LINC01158|linc-Brn1a|linc-POU3F3
Transcripts ENSG00000233639
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:49513
OMIM ID 618169
lncRNASNP2 ID PANTR1
Summary Predicted to act upstream of or within regulation of gene expression. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [PANTR1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009788 chr2 2 10 2 14 View
1009793 chr2 2 10 2 14 View
1009794 chr2 2 10 2 14 View
1009797 chr2 2 10 2 14 View
1009798 chr2 2 10 2 14 View
1009800 chr2 2 10 2 14 View
1009801 chr2 2 10 2 14 View
1009903 chr2 2 10 2 14 View
1009904 chr2 2 10 2 14 View
1009991 chr2 2 10 2 14 View

Target gene [PANTR1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - PANTR1 expression across samples

Volcano Plot

Bar Plot