HTLV1 Target gene Detail Information

> PCAT29 Gene Search Result


Gene Information
Gene Name PCAT29
Gene ID 104472713
Gene Full Name prostate cancer associated transcript 29
Gene Alias -
Transcripts ENSG00000245750
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:50895
OMIM ID 616273
Summary This gene is thought to produce a functional long non-coding RNA. This transcript was identified in prostate cancer cells and may suppress tumor formation. [provided by RefSeq, Feb 2015]
Target gene [PCAT29] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004998 chr15 98 1 0 99 View

Target gene [PCAT29] related to Omics data
Data ID Experiment type Sample number Platform
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PCAT29 peak across samples

Peak Plot