HTLV1 Target gene Detail Information

> PCNX2 Gene Search Result


Gene Information
Gene Name PCNX2
Gene ID 80003
Gene Full Name pecanex 2
Gene Alias PCNXL2
Transcripts ENSG00000135749
Virus HTLV1
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID A6NKB5
HGNC ID HGNC:8736
OMIM ID 617656
Summary This gene contains coding mononucleotide repeats that are associated with tumors of high mcrosatellite instability (MSI-H). Defects in this gene are involved in the tumorigenesis of MSI-H colorectal carcinomas. [provided by RefSeq, Jun 2016]
Target gene [PCNX2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012508 chr1 17 5 0 22 View

Target gene [PCNX2] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PCNX2 peak across samples

Peak Plot