HTLV1 Target gene Detail Information

> PHACTR1 Gene Search Result


Gene Information
Gene Name PHACTR1
Gene ID 221692
Gene Full Name phosphatase and actin regulator 1
Gene Alias DEE70|EIEE70|RPEL|RPEL1|dJ257A7.2
Transcripts ENSG00000112137
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9C0D0
HGNC ID HGNC:20990
OMIM ID 608723
Summary The protein encoded by this gene is a member of the phosphatase and actin regulator family of proteins. This family member can bind actin and regulate the reorganization of the actin cytoskeleton. It plays a role in tubule formation and in endothelial cell survival. Polymorphisms in this gene are associated with susceptibility to myocardial infarction, coronary artery disease and cervical artery dissection. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Apr 2016]
Target gene [PHACTR1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001062 chr6 503 63 43 609 View
6021908 chr6 4 1 0 5 View
6031298 chr6 0 0 0 0 View

Target gene [PHACTR1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PHACTR1 peak across samples

Peak Plot