HBV Target gene Detail Information

> PKD1P6-NPIPP1 Gene Search Result


Gene Information
Gene Name PKD1P6-NPIPP1
Gene ID 105369154
Gene Full Name -
Gene Alias -
Transcripts ENSG00000290394
Virus HBV
Gene Type pseudo
Summary This locus represents naturally-occurring readthrough transcription between two unprocessed pseudogenes, PKD1P6 (polycystic kidney disease 1 (autosomal dominant) pseudogene 6) and NPIPP1 (nuclear pore complex interacting protein pseudogene 1). The individual pseudogene loci are not curated as transcribed regions. Readthrough transcripts likely do not encode functional proteins. [provided by RefSeq, Jan 2016]
Target gene [PKD1P6-NPIPP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011966 chr16 7 1 0 8 View

Target gene [PKD1P6-NPIPP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - PKD1P6-NPIPP1 peak across samples

Peak Plot

> Dataset: GSE68402 - PKD1P6-NPIPP1 peak across samples

Peak Plot

> Dataset: GSE270130 - PKD1P6-NPIPP1 peak across samples

Peak Plot

> Dataset: GSE131257 - PKD1P6-NPIPP1 peak across samples

Peak Plot