HBV Target gene Detail Information

> PLEKHG4B Gene Search Result


Gene Information
Gene Name PLEKHG4B
Gene ID 153478
Gene Full Name pleckstrin homology and RhoGEF domain containing G4B
Gene Alias ARHGEF48
Transcripts ENSG00000153404
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96PX9
HGNC ID HGNC:29399
OMIM ID 620665
Summary This gene encodes a large protein that contains a pleckstrin homology domain and may function as a guanine nucleotide exchange factor. [provided by RefSeq, May 2017]
Target gene [PLEKHG4B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014374 chr5 1 2 0 3 View
1014521 chr5 2 1 0 3 View
1042906 chr5 3 3 0 6 View
1042907 chr5 18 76 18 112 View

Target gene [PLEKHG4B] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - PLEKHG4B peak across samples

Peak Plot

> Dataset: GSE68402 - PLEKHG4B peak across samples

Peak Plot

> Dataset: GSE270130 - PLEKHG4B peak across samples

Peak Plot

> Dataset: GSE131257 - PLEKHG4B peak across samples

Peak Plot