HBV Target gene Detail Information

> PLPPR1 Gene Search Result


Gene Information
Gene Name PLPPR1
Gene ID 54886
Gene Full Name phospholipid phosphatase related 1
Gene Alias LPPR1|PRG-3|PRG3
Transcripts ENSG00000148123
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
Uniport_ID Q8TBJ4
HGNC ID HGNC:25993
OMIM ID 619590
Summary This gene encodes a member of the plasticity-related gene (PRG) family. Members of the PRG family mediate lipid phosphate phosphatase activity in neurons and are known to be involved in neuronal plasticity. The protein encoded by this gene does not perform its function through enzymatic phospholipid degradation. This gene is strongly expressed in brain. It shows dynamic expression regulation during brain development and neuronal excitation. Alternatively spliced transcript variants encoding the same protein have been observed. [provided by RefSeq, Jul 2008]
Target gene [PLPPR1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003100 chr9 36 129 0 165 View
1007499 chr9 2 7 18 27 View
1007930 chr9 21 2 0 23 View
1016475 chr9 1 0 0 1 View
1016476 chr9 1 0 0 1 View
1019175 chr9 0 0 0 0 View
1019176 chr9 0 0 0 0 View
1040932 chr9 1 0 0 1 View
1043474 chr9 177 386 64 627 View

Target gene [PLPPR1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - PLPPR1 expression across samples

Volcano Plot

Bar Plot