HBV Target gene Detail Information

> PPP1R1C Gene Search Result


Gene Information
Gene Name PPP1R1C
Gene ID 151242
Gene Full Name protein phosphatase 1 regulatory inhibitor subunit 1C
Gene Alias IPP5
Transcripts ENSG00000150722
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nucleoli, Golgi apparatus;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8WVI7
HGNC ID HGNC:14940
OMIM ID 613240
Summary Protein phosphatase-1 (PP1) is a major serine/threonine phosphatase that regulates a variety of cellular functions. PP1 consists of a catalytic subunit (see PPP1CA; MIM 176875) and regulatory subunits that determine the subcellular localization of PP1 or regulate its function. PPP1R1C belongs to a group of PP1 inhibitory subunits that are themselves regulated by phosphorylation (Wang et al., 2008 [PubMed 18310074]).[supplied by OMIM, Feb 2010]
Target gene [PPP1R1C] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003181 chr2 69 90 0 159 View
1008521 chr2 14 6 0 20 View
1008522 chr2 14 6 0 20 View

Target gene [PPP1R1C] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - PPP1R1C peak across samples

Peak Plot

> Dataset: GSE68402 - PPP1R1C peak across samples

Peak Plot

> Dataset: GSE270130 - PPP1R1C peak across samples

Peak Plot

> Dataset: GSE100400 - PPP1R1C peak across samples

Peak Plot

> Dataset: GSE131257 - PPP1R1C peak across samples

Peak Plot