HTLV1 Target gene Detail Information

> PPP1R9A Gene Search Result


Gene Information
Gene Name PPP1R9A
Gene ID 55607
Gene Full Name protein phosphatase 1 regulatory subunit 9A
Gene Alias NRB1|NRBI|Neurabin-I
Transcripts ENSG00000158528
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9ULJ8
HGNC ID HGNC:14946
OMIM ID 602468
Summary This gene is imprinted, and located in a cluster of imprinted genes on chromosome 7q12. This gene is transcribed in both neuronal and multiple embryonic tissues, and it is maternally expressed mainly in embryonic skeletal muscle tissues and biallelically expressed in other embryonic tissues. The protein encoded by this gene includes a PDZ domain and a sterile alpha motif (SAM). It is a regulatory subunit of protein phosphatase I, and controls actin cytoskeleton reorganization. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2009]
Target gene [PPP1R9A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6026493 chr7 2 0 0 2 View
6031219 chr7 0 0 0 0 View

Target gene [PPP1R9A] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PPP1R9A peak across samples

Peak Plot