HTLV1 Target gene Detail Information

> PSPH Gene Search Result


Gene Information
Gene Name PSPH
Gene ID 5723
Gene Full Name phosphoserine phosphatase
Gene Alias PSP|PSPHD
Transcripts ENSG00000146733
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID P78330
HGNC ID HGNC:9577
OMIM ID 172480
Summary The protein encoded by this gene belongs to a subfamily of the phosphotransferases. This encoded enzyme is responsible for the third and last step in L-serine formation. It catalyzes magnesium-dependent hydrolysis of L-phosphoserine and is also involved in an exchange reaction between L-serine and L-phosphoserine. Deficiency of this protein is thought to be linked to Williams syndrome. [provided by RefSeq, Jul 2008]
Target gene [PSPH] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001246 chr7 505 11 0 516 View
6019716 chr7 7 0 0 7 View
6020678 chr7 6 0 0 6 View
6020692 chr7 6 0 0 6 View
6021742 chr7 5 0 0 5 View
6021747 chr7 5 0 0 5 View
6021752 chr7 5 0 0 5 View
6031663 chr7 0 0 0 0 View

Target gene [PSPH] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PSPH peak across samples

Peak Plot