HPV Target gene Detail Information

> PTCHD1-AS Gene Search Result


Gene Information
Gene Name PTCHD1-AS
Gene ID 100873065
Gene Full Name PTCHD1 antisense RNA (head to head)
Gene Alias DDX53-AS1|PHEX-AS1|PTCHD1AS1|PTCHD1AS2
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:37703
OMIM ID 301140
Target gene [PTCHD1-AS] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006695 chrX 0 17 0 17 View
5009615 chrX 1 1 0 2 View
5010614 chrX 1 0 2 3 View
5016543 chrX 9 6 0 15 View
5016544 chrX 4 0 0 4 View
5016545 chrX 0 1 1 2 View
5016546 chrX 3 1 4 8 View

Target gene [PTCHD1-AS] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - PTCHD1-AS peak across samples

Peak Plot

> Dataset: GSE143026 - PTCHD1-AS peak across samples

Peak Plot