HTLV1 Target gene Detail Information

> PTPRQ Gene Search Result


Gene Information
Gene Name PTPRQ
Gene ID 374462
Gene Full Name protein tyrosine phosphatase receptor type Q
Gene Alias DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q
Transcripts ENSG00000139304
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Human disease related genes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins
HGNC ID HGNC:9679
OMIM ID 603317
Summary This locus encodes a member of the type III receptor-like protein-tyrosine phosphatase family. The encoded protein catalyzes the dephosphorylation of phosphotyrosine and phosphatidylinositol and plays roles in cellular proliferation and differentiation. Mutations at this locus have been linked to autosomal recessive deafness. [provided by RefSeq, Mar 2014]
Target gene [PTPRQ] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008939 chr12 1 38 2 41 View
6024148 chr12 1 3 0 4 View

Target gene [PTPRQ] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PTPRQ peak across samples

Peak Plot