HBV Target gene Detail Information

> PTPRZ1 Gene Search Result


Gene Information
Gene Name PTPRZ1
Gene ID 5803
Gene Full Name protein tyrosine phosphatase receptor type Z1
Gene Alias HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan
Transcripts ENSG00000106278
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol;Vesicles;Secreted in brain;
Membrane Info Enzymes, Plasma proteins, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID P23471
HGNC ID HGNC:9685
OMIM ID 176891
Summary This gene encodes a member of the receptor protein tyrosine phosphatase family. Expression of this gene is restricted to the central nervous system (CNS), and it may be involved in the regulation of specific developmental processes in the CNS. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, May 2011]
Target gene [PTPRZ1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014949 chr7 2 1 0 3 View
1016500 chr7 0 1 0 1 View
1043261 chr7 489 414 451 1354 View

Target gene [PTPRZ1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - PTPRZ1 peak across samples

Peak Plot

> Dataset: GSE68402 - PTPRZ1 peak across samples

Peak Plot

> Dataset: GSE270130 - PTPRZ1 peak across samples

Peak Plot

> Dataset: GSE100400 - PTPRZ1 peak across samples

Peak Plot

> Dataset: GSE131257 - PTPRZ1 peak across samples

Peak Plot