HTLV1 Target gene Detail Information

> PUDP Gene Search Result


Gene Information
Gene Name PUDP
Gene ID 8226
Gene Full Name pseudouridine 5'-phosphatase
Gene Alias DXF68S1E|FAM16AX|GS1|HDHD1|HDHD1A
Transcripts ENSG00000130021
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q08623
HGNC ID HGNC:16818
OMIM ID 306480
Summary This gene encodes a member of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The encoded protein has no known biological function. This gene has a pseudogene on chromosome 1. Multiple alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2010]
Target gene [PUDP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003200 chrX 69 51 56 176 View
6017945 chrX 9 0 1 10 View
6021429 chrX 4 2 0 6 View
6021430 chrX 4 2 0 6 View
6028613 chrX 1 0 0 1 View

Target gene [PUDP] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PUDP peak across samples

Peak Plot