HTLV1 Target gene Detail Information

> RNU5F-1 Gene Search Result


Gene Information
Gene Name RNU5F-1
Gene ID 26828
Gene Full Name RNA, U5F small nuclear 1
Gene Alias RNU5F|U5F
Transcripts ENSG00000199377
Virus HTLV1
Gene Type snRNA
HGNC ID HGNC:10216
OMIM ID 620363
Summary Predicted to be involved in formation of quadruple SL/U4/U5/U6 snRNP and spliceosomal tri-snRNP complex assembly. Predicted to be part of U4/U6 x U5 tri-snRNP complex and U5 snRNP. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [RNU5F-1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6016630 chr1 1 11 0 12 View
6022061 chr1 4 1 0 5 View

Target gene [RNU5F-1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RNU5F-1 peak across samples

Peak Plot