HBV Target gene Detail Information

> ROCK1P1 Gene Search Result


Gene Information
Gene Name ROCK1P1
Gene ID 727758
Gene Full Name Rho associated coiled-coil containing protein kinase 1 pseudogene 1
Gene Alias ROCK1P
Transcripts ENSG00000290877
Virus HBV
Gene Type pseudo
HGNC ID HGNC:37832
Target gene [ROCK1P1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000458 chr18 829 1073 288 2190 View
1000460 chr18 851 883 447 2181 View
1000560 chr18 797 801 284 1882 View
1023442 chr18 5 22 0 27 View
1023483 chr18 7 24 0 31 View
1024059 chr18 745 612 406 1763 View
1042296 chr18 1015 1416 462 2893 View
1042297 chr18 733 1079 323 2135 View

Target gene [ROCK1P1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - ROCK1P1 peak across samples

Peak Plot

> Dataset: GSE68402 - ROCK1P1 peak across samples

Peak Plot

> Dataset: GSE270130 - ROCK1P1 peak across samples

Peak Plot

> Dataset: GSE100400 - ROCK1P1 peak across samples

Peak Plot

> Dataset: GSE131257 - ROCK1P1 peak across samples

Peak Plot