HBV Target gene Detail Information

> RPH3A Gene Search Result


Gene Information
Gene Name RPH3A
Gene ID 22895
Gene Full Name rabphilin 3A
Gene Alias -
Transcripts ENSG00000089169
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
Uniport_ID Q9Y2J0
HGNC ID HGNC:17056
OMIM ID 612159
Summary The protein encoded by this gene is thought to be an effector for RAB3A, which is a small G protein that acts in the late stages of neurotransmitter exocytosis. The encoded protein may be involved in neurotransmitter release and synaptic vesicle traffic. [provided by RefSeq, Dec 2016]
Target gene [RPH3A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008117 chr12 5 13 4 22 View
1008124 chr12 5 13 4 22 View
1008133 chr12 5 13 4 22 View
1008136 chr12 5 13 4 22 View
1008141 chr12 5 13 4 22 View
1008143 chr12 5 13 4 22 View
1008155 chr12 5 13 4 22 View
1008159 chr12 5 13 4 22 View
1008160 chr12 5 13 4 22 View
1008167 chr12 5 13 4 22 View
1008169 chr12 5 13 4 22 View
1008172 chr12 5 13 4 22 View
1008174 chr12 5 13 4 22 View
1008177 chr12 5 13 4 22 View
1008180 chr12 5 13 4 22 View
1012478 chr12 6 0 0 6 View
1018350 chr12 0 0 0 0 View

Target gene [RPH3A] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - RPH3A peak across samples

Peak Plot

> Dataset: GSE68402 - RPH3A peak across samples

Peak Plot

> Dataset: GSE270130 - RPH3A peak across samples

Peak Plot

> Dataset: GSE100400 - RPH3A peak across samples

Peak Plot

> Dataset: GSE131257 - RPH3A peak across samples

Peak Plot