HBV Target gene Detail Information

> RPL23AP53 Gene Search Result


Gene Information
Gene Name RPL23AP53
Gene ID 644128
Gene Full Name ribosomal protein L23a pseudogene 53
Gene Alias RPL23A_20_869
Virus HBV
Gene Type pseudo
HGNC ID HGNC:35921
Target gene [RPL23AP53] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002715 chr8 88 112 16 216 View
1003740 chr8 32 79 1 112 View
1009293 chr8 8 8 0 16 View
1020627 chr8 8 8 0 16 View
1022456 chr8 32 79 1 112 View

Target gene [RPL23AP53] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - RPL23AP53 peak across samples

Peak Plot

> Dataset: GSE68402 - RPL23AP53 peak across samples

Peak Plot

> Dataset: GSE270130 - RPL23AP53 peak across samples

Peak Plot