HBV Target gene Detail Information

> RPSAP52 Gene Search Result


Gene Information
Gene Name RPSAP52
Gene ID 204010
Gene Full Name ribosomal protein SA pseudogene 52
Gene Alias RPSA_17_1251
Transcripts ENSG00000293176
Virus HBV
Gene Type pseudo
HGNC ID HGNC:35752
Target gene [RPSAP52] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014478 chr12 3 0 0 3 View
1015307 chr12 1 0 1 2 View
1021369 chr12 3 0 0 3 View
1021370 chr12 1 0 1 2 View
1041980 chr12 10 0 0 10 View
1041981 chr12 4 0 1 5 View

Target gene [RPSAP52] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - RPSAP52 peak across samples

Peak Plot

> Dataset: GSE68402 - RPSAP52 peak across samples

Peak Plot

> Dataset: GSE270130 - RPSAP52 peak across samples

Peak Plot

> Dataset: GSE131257 - RPSAP52 peak across samples

Peak Plot