HTLV1 Target gene Detail Information

> RSPH4A Gene Search Result


Gene Information
Gene Name RSPH4A
Gene ID 345895
Gene Full Name radial spoke head component 4A
Gene Alias CILD11|RSHL3|RSPH6B|dJ412I7.1
Transcripts ENSG00000111834
Virus HTLV1
Gene Type protein-coding
HPA Location Info Connecting piece, Flagellar centriole;Annulus;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q5TD94
HGNC ID HGNC:21558
OMIM ID 612647
Summary This gene encodes a protein that appears to be a component the radial spoke head, as determined by homology to similar proteins in the biflagellate alga Chlamydomonas reinhardtii and other ciliates. Radial spokes, which are regularly spaced along cilia, sperm, and flagella axonemes, consist of a thin 'stalk' and a bulbous 'head' that form a signal transduction scaffold between the central pair of microtubules and dynein. Mutations in this gene cause primary ciliary dyskinesia 1, a disease arising from dysmotility of motile cilia and sperm. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009]
Target gene [RSPH4A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6020762 chr6 6 0 0 6 View

Target gene [RSPH4A] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - RSPH4A peak across samples

Peak Plot