HPV Target gene Detail Information

> RTL4 Gene Search Result


Gene Information
Gene Name RTL4
Gene ID 340595
Gene Full Name retrotransposon Gag like 4
Gene Alias Mar4|Mart4|SIRH1|SIRH11|ZCCHC16
Transcripts ENSG00000187823
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Plasma membrane, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q6ZR62
HGNC ID HGNC:25214
OMIM ID 301131
Summary Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to act upstream of or within cognition and norepinephrine metabolic process. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [RTL4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5007527 chrX 2 0 0 2 View
5016596 chrX 2 0 0 2 View
5016597 chrX 2 0 0 2 View
5016598 chrX 2 0 0 2 View

Target gene [RTL4] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - RTL4 peak across samples

Peak Plot