HPV Target gene Detail Information

> SALRNA3 Gene Search Result


Gene Information
Gene Name SALRNA3
Gene ID 104548972
Gene Full Name senescence associated long non-coding RNA 3
Gene Alias SAL-RNA3|XLOC_025918
Transcripts ENSG00000281264
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:49002
lncRNASNP2 ID SALRNA3
Target gene [SALRNA3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010026 chr15 19 4 0 23 View

Target gene [SALRNA3] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - SALRNA3 peak across samples

Peak Plot