HTLV1 Target gene Detail Information

> SARNP Gene Search Result


Gene Information
Gene Name SARNP
Gene ID 84324
Gene Full Name SAP domain containing ribonucleoprotein
Gene Alias CIP29|HCC1|HSPC316|THO1
Transcripts ENSG00000205323
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear speckles;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID P82979
HGNC ID HGNC:24432
OMIM ID 610049
Summary This gene encodes a protein that is upregulated in response to various cytokines. The encoded protein may play a role in cell cycle progression. A translocation between this gene and the myeloid/lymphoid leukemia gene, resulting in expression of a chimeric protein, has been associated with acute myelomonocytic leukemia. Pseudogenes exist on chromosomes 7 and 8. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009]
Target gene [SARNP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6013341 chr12 13 6 0 19 View

Target gene [SARNP] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SARNP peak across samples

Peak Plot