HTLV1 Target gene Detail Information

> SEM1 Gene Search Result


Gene Information
Gene Name SEM1
Gene ID 7979
Gene Full Name SEM1 26S proteasome subunit
Gene Alias C7orf76|DSS1|ECD|PSMD15|SHFD1|SHFM1|SHSF1|Shfdg1
Transcripts ENSG00000127922
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID P60896, Q6ZVN7
HGNC ID HGNC:10845
OMIM ID 601285
Summary The product of this gene has been localized within the split hand/split foot malformation locus SHFM1 at chromosome 7. It has been proposed to be a candidate gene for the autosomal dominant form of the heterogeneous limb developmental disorder split hand/split foot malformation type 1. In addition, it has been shown to directly interact with BRCA2. It also may play a role in the completion of the cell cycle. [provided by RefSeq, Jul 2008]
Target gene [SEM1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006823 chr7 49 7 7 63 View

Target gene [SEM1] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SEM1 peak across samples

Peak Plot