HBV Target gene Detail Information

> SEMA6B Gene Search Result


Gene Information
Gene Name SEMA6B
Gene ID 10501
Gene Full Name semaphorin 6B
Gene Alias EPM11|SEM-SEMA-Y|SEM-SEMA-Z|SEMA-VIB|SEMAN|semaZ
Transcripts ENSG00000167680
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Predicted membrane proteins
Uniport_ID Q9H3T3
HGNC ID HGNC:10739
OMIM ID 608873
Summary This gene encodes a member of the semaphorin family, a group of proteins characterized by the presence of a conserved semaphorin (sema) domain. Whereas some semaphorins are transmembrane proteins, others are secreted. Semaphorins play a major role in axon guidance. The protein encoded by this gene may be involved in both peripheral and central nervous system development. [provided by RefSeq, Jul 2008]
Target gene [SEMA6B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002855 chr19 143 50 1 194 View
1002863 chr19 143 49 1 193 View
1002864 chr19 143 49 1 193 View
1005072 chr19 53 7 1 61 View
1010629 chr19 10 1 0 11 View

Target gene [SEMA6B] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - SEMA6B expression across samples

Volcano Plot

Bar Plot