HPV Target gene Detail Information

> SEPTIN3 Gene Search Result


Gene Information
Gene Name SEPTIN3
Gene ID 55964
Gene Full Name septin 3
Gene Alias SEP3|SEPT3|bK250D10.3
Transcripts ENSG00000100167
Virus HPV
Gene Type protein-coding
HPA Location Info Plasma membrane, Actin filaments;Nucleoplasm, Primary cilium;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9UH03
HGNC ID HGNC:10750
OMIM ID 608314
Summary This gene belongs to the septin family of GTPases. Members of this family are required for cytokinesis. Expression is upregulated by retinoic acid in a human teratocarcinoma cell line. The specific function of this gene has not been determined. Alternative splicing of this gene results in several transcript variants encoding different isoforms. [provided by RefSeq, May 2018]
Target gene [SEPTIN3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011032 chr22 27 0 0 27 View

Target gene [SEPTIN3] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - SEPTIN3 peak across samples

Peak Plot