HTLV1 Target gene Detail Information

> SEPTIN9 Gene Search Result


Gene Information
Gene Name SEPTIN9
Gene ID 10801
Gene Full Name septin 9
Gene Alias AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1
Transcripts ENSG00000184640
Virus HTLV1
Gene Type protein-coding
HPA Location Info Actin filaments;Microtubules, Cytokinetic bridge, Primary cilium;
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9UHD8
HGNC ID HGNC:7323
OMIM ID 604061
Summary This gene is a member of the septin family involved in cytokinesis and cell cycle control. This gene is a candidate for the ovarian tumor suppressor gene. Mutations in this gene cause hereditary neuralgic amyotrophy, also known as neuritis with brachial predilection. A chromosomal translocation involving this gene on chromosome 17 and the MLL gene on chromosome 11 results in acute myelomonocytic leukemia. Multiple alternatively spliced transcript variants encoding different isoforms have been described.[provided by RefSeq, Mar 2009]
Target gene [SEPTIN9] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003354 chr17 162 3 0 165 View
6007369 chr17 28 11 17 56 View
6008155 chr17 47 1 0 48 View
6009472 chr17 37 0 0 37 View
6010343 chr17 16 15 0 31 View
6011763 chr17 15 6 4 25 View
6013105 chr17 2 15 3 20 View
6033749 chr17 75 30 1 106 View

Target gene [SEPTIN9] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SEPTIN9 peak across samples

Peak Plot