HBV Target gene Detail Information

> SHLD2P1 Gene Search Result


Gene Information
Gene Name SHLD2P1
Gene ID 414241
Gene Full Name shieldin complex subunit 2 pseudogene 1
Gene Alias FAM35B|FAM35BP|FAM35EP|bA38L15.1
Transcripts ENSG00000165874
Virus HBV
Gene Type pseudo
HGNC ID HGNC:31425
Target gene [SHLD2P1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013143 chr10 5 0 0 5 View
1013165 chr10 5 0 0 5 View
1018534 chr10 0 0 0 0 View
1018535 chr10 0 0 0 0 View
1018629 chr10 0 0 0 0 View
1020844 chr10 5 0 0 5 View

Target gene [SHLD2P1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SHLD2P1 peak across samples

Peak Plot

> Dataset: GSE68402 - SHLD2P1 peak across samples

Peak Plot

> Dataset: GSE270130 - SHLD2P1 peak across samples

Peak Plot