Gene Information
|
Gene Name
|
SHLD2P1 |
|
Gene ID
|
414241
|
|
Gene Full Name
|
shieldin complex subunit 2 pseudogene 1 |
|
Gene Alias
|
FAM35B|FAM35BP|FAM35EP|bA38L15.1 |
|
Transcripts
|
ENSG00000165874
|
|
Virus
|
HPV |
|
Gene Type
|
pseudo |
|
HGNC ID
|
HGNC:31425
|
Target gene [SHLD2P1] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5012506 |
chr10 |
34 |
2 |
7 |
43 |
View |
| 5012507 |
chr10 |
34 |
2 |
7 |
43 |
View |
Target gene [SHLD2P1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE183048
|
Chip-seq |
24 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE181805
|
Expression array |
25 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
GSE140662
|
Expression array |
8 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - SHLD2P1 expression across samples
|
Volcano Plot
|
Bar Plot
|
HPV Target gene Detail Information
