HPV Target gene Detail Information

> SHLD2P3 Gene Search Result


Gene Information
Gene Name SHLD2P3
Gene ID 439965
Gene Full Name shieldin complex subunit 2 pseudogene 3
Gene Alias FAM35B2|FAM35DP
Transcripts ENSG00000303991
Virus HPV
Gene Type pseudo
HGNC ID HGNC:34038
Target gene [SHLD2P3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5012511 chr10 44 3 3 50 View

Target gene [SHLD2P3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SHLD2P3 peak across samples

Peak Plot

> Dataset: GSE143026 - SHLD2P3 peak across samples

Peak Plot