HBV Target gene Detail Information

> SKIC3 Gene Search Result


Gene Information
Gene Name SKIC3
Gene ID 9652
Gene Full Name SKI3 subunit of superkiller complex
Gene Alias KIAA0372|Ski3|THES|TTC37
Transcripts ENSG00000198677
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q6PGP7
HGNC ID HGNC:23639
OMIM ID 614589
Summary This gene encodes a protein with twenty tetratricopeptide (TPR) repeats. Tetratricopeptide repeat containing motifs are found in a variety of proteins and may mediate protein-protein interactions and chaperone activity. Mutations in this gene are associated with trichohepatoenteric syndrome. [provided by RefSeq, Jul 2010]
Target gene [SKIC3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005402 chr5 44 11 0 55 View

Target gene [SKIC3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465
Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400
Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SKIC3 peak across samples

Peak Plot


> Dataset: GSE68402 - SKIC3 peak across samples

Peak Plot


> Dataset: GSE270130 - SKIC3 peak across samples

Peak Plot


> Dataset: GSE100400 - SKIC3 peak across samples

Peak Plot


> Dataset: GSE131257 - SKIC3 peak across samples

Peak Plot