HPV Target gene Detail Information

> SKIC3 Gene Search Result


Gene Information
Gene Name SKIC3
Gene ID 9652
Gene Full Name SKI3 subunit of superkiller complex
Gene Alias KIAA0372|Ski3|THES|TTC37
Transcripts ENSG00000198677
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q6PGP7
HGNC ID HGNC:23639
OMIM ID 614589
Summary This gene encodes a protein with twenty tetratricopeptide (TPR) repeats. Tetratricopeptide repeat containing motifs are found in a variety of proteins and may mediate protein-protein interactions and chaperone activity. Mutations in this gene are associated with trichohepatoenteric syndrome. [provided by RefSeq, Jul 2010]
Target gene [SKIC3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005030 chr5 3 0 0 3 View
5010229 chr5 85 40 266 391 View
5010381 chr5 0 10 0 10 View
5010638 chr5 11 8 1 20 View

Target gene [SKIC3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SKIC3 peak across samples

Peak Plot

> Dataset: GSE143026 - SKIC3 peak across samples

Peak Plot