HBV Target gene Detail Information

> SLC30A10 Gene Search Result


Gene Information
Gene Name SLC30A10
Gene ID 55532
Gene Full Name solute carrier family 30 member 10
Gene Alias HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10
Transcripts ENSG00000196660
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q6XR72
HGNC ID HGNC:25355
OMIM ID 611146
Summary This gene is highly expressed in the liver and is inducible by manganese. Its protein product appears to be critical in maintaining manganese levels, and has higher specificity for manganese than zinc. Loss of function mutations appear to result in a pleomorphic phenotype, including dystonia and adult-onset parkinsonism. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Mar 2012]
Target gene [SLC30A10] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003290 chr1 83 57 8 148 View
1003291 chr1 83 57 8 148 View
1008647 chr1 12 7 1 20 View
1016143 chr1 1 0 0 1 View

Target gene [SLC30A10] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SLC30A10 peak across samples

Peak Plot

> Dataset: GSE68402 - SLC30A10 peak across samples

Peak Plot

> Dataset: GSE270130 - SLC30A10 peak across samples

Peak Plot

> Dataset: GSE100400 - SLC30A10 peak across samples

Peak Plot

> Dataset: GSE131257 - SLC30A10 peak across samples

Peak Plot