HBV Target gene Detail Information

> SMARCAD1-DT Gene Search Result


Gene Information
Gene Name SMARCAD1-DT
Gene ID 101929210
Gene Full Name SMARCAD1 divergent transcript
Gene Alias -
Transcripts ENSG00000246541
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:53364
Target gene [SMARCAD1-DT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004404 chr4 1 78 3 82 View
1004735 chr4 1 68 1 70 View
1004736 chr4 1 68 1 70 View
1004737 chr4 1 68 1 70 View
1004739 chr4 1 68 1 70 View
1004740 chr4 1 68 1 70 View
1004741 chr4 1 68 1 70 View
1004775 chr4 1 67 1 69 View
1011016 chr4 10 0 0 10 View
1016650 chr4 0 0 1 1 View
1016667 chr4 0 0 1 1 View
1016683 chr4 0 0 1 1 View
1016692 chr4 0 0 1 1 View
1018294 chr4 0 0 0 0 View

Target gene [SMARCAD1-DT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SMARCAD1-DT peak across samples

Peak Plot

> Dataset: GSE68402 - SMARCAD1-DT peak across samples

Peak Plot

> Dataset: GSE270130 - SMARCAD1-DT peak across samples

Peak Plot

> Dataset: GSE131257 - SMARCAD1-DT peak across samples

Peak Plot