HPV Target gene Detail Information

> SMIM30 Gene Search Result


Gene Information
Gene Name SMIM30
Gene ID 401397
Gene Full Name small integral membrane protein 30
Gene Alias LINC00998|MAVI1
Transcripts ENSG00000214194
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted membrane proteins
Uniport_ID A4D0T7
HGNC ID HGNC:48953
Summary Involved in negative regulation of type I interferon-mediated signaling pathway. Located in endoplasmic reticulum membrane and mitochondrial membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SMIM30] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005160 chr7 0 1 1 2 View
5011895 chr7 0 0 0 0 View

Target gene [SMIM30] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SMIM30 peak across samples

Peak Plot

> Dataset: GSE143026 - SMIM30 peak across samples

Peak Plot