EBV Target gene Detail Information

> SNORD139 Gene Search Result


Gene Information
Gene Name SNORD139
Gene ID 116936
Gene Full Name small nucleolar RNA, C/D box 139
Gene Alias RNU86|U82|U86
Virus EBV
Gene Type snoRNA
HGNC ID HGNC:50421
OMIM ID 611069
Summary Intronic regions of ribosomal protein genes can harbor noncoding small nucleolar RNAs (snoRNAs), like U86, which are generated during pre-mRNA processing. snoRNAs form part of the small nucleolar ribonucleoprotein particles (snoRNPs) involved in pre-rRNA processing and modification. snoRNAs of the box C/D class, like U86, function in 2-prime-O-ribose methylation of rRNAs (Duga et al., 2000 [PubMed 10684968]).[supplied by OMIM, Mar 2008]
Target gene [SNORD139] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3001143 chr22 345 94 6 445 View

Target gene [SNORD139] related to Omics data
Data ID Experiment type Sample number Platform
GSE45919 Expression array 24 Illumina HumanHT-12 V4.0 expression beadchip
GSE58240 Expression array 32 Illumina HumanHT-12 V4.0 expression beadchip
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]