HBV Target gene Detail Information

> SPAG16 Gene Search Result


Gene Information
Gene Name SPAG16
Gene ID 79582
Gene Full Name sperm associated antigen 16
Gene Alias PF20|WDR29
Transcripts ENSG00000144451
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol, Equatorial segment;Vesicles, Plasma membrane, Acrosome;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8N0X2
HGNC ID HGNC:23225
OMIM ID 612173
Summary Cilia and flagella are comprised of a microtubular backbone, the axoneme, which is organized by the basal body and surrounded by plasma membrane. SPAG16 encodes 2 major proteins that associate with the axoneme of sperm tail and the nucleus of postmeiotic germ cells, respectively (Zhang et al., 2007 [PubMed 17699735]).[supplied by OMIM, Jul 2008]
Target gene [SPAG16] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003003 chr2 98 58 20 176 View
1007155 chr2 30 0 0 30 View
1007816 chr2 5 1 18 24 View
1012269 chr2 5 2 0 7 View
1012270 chr2 5 2 0 7 View
1017503 chr2 0 0 0 0 View

Target gene [SPAG16] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SPAG16 peak across samples

Peak Plot

> Dataset: GSE68402 - SPAG16 peak across samples

Peak Plot

> Dataset: GSE270130 - SPAG16 peak across samples

Peak Plot

> Dataset: GSE100400 - SPAG16 peak across samples

Peak Plot

> Dataset: GSE131257 - SPAG16 peak across samples

Peak Plot