HBV Target gene Detail Information

> SRCAP Gene Search Result


Gene Information
Gene Name SRCAP
Gene ID 10847
Gene Full Name Snf2 related CREBBP activator protein
Gene Alias DEHMBA|DOMO1|EAF1|FLHS|SWR1
Transcripts ENSG00000080603
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nuclear bodies, Golgi apparatus;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q6ZRS2
HGNC ID HGNC:16974
OMIM ID 611421
Summary This gene encodes the core catalytic component of the multiprotein chromatin-remodeling SRCAP complex. The encoded protein is an ATPase that is necessary for the incorporation of the histone variant H2A.Z into nucleosomes. It can function as a transcriptional activator in Notch-mediated, CREB-mediated and steroid receptor-mediated transcription. Mutations in this gene cause Floating-Harbor syndrome, a rare disorder characterized by short stature, language deficits and dysmorphic facial features. [provided by RefSeq, Feb 2012]
Target gene [SRCAP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010925 chr16 10 0 0 10 View
1021617 chr16 10 0 0 10 View
1042186 chr16 10 0 0 10 View

Target gene [SRCAP] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SRCAP peak across samples

Peak Plot

> Dataset: GSE68402 - SRCAP peak across samples

Peak Plot

> Dataset: GSE270130 - SRCAP peak across samples

Peak Plot

> Dataset: GSE131257 - SRCAP peak across samples

Peak Plot