HBV Target gene Detail Information

> SUFU Gene Search Result


Gene Information
Gene Name SUFU
Gene ID 51684
Gene Full Name SUFU negative regulator of hedgehog signaling
Gene Alias BCNS2|JBTS32|PRO1280|SUFUH|SUFUXL
Transcripts ENSG00000107882
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Primary cilium;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9UMX1
HGNC ID HGNC:16466
OMIM ID 607035
Summary The Hedgehog signaling pathway plays an important role in early human development. The pathway is a signaling cascade that plays a role in pattern formation and cellular proliferation during development. This gene encodes a negative regulator of the hedgehog signaling pathway. Defects in this gene are a cause of medulloblastoma. Alternative splicing results in multiple transcript variants.[provided by RefSeq, May 2010]
Target gene [SUFU] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1041014 chr10 63 3 0 66 View

Target gene [SUFU] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - SUFU peak across samples

Peak Plot

> Dataset: GSE68402 - SUFU peak across samples

Peak Plot

> Dataset: GSE270130 - SUFU peak across samples

Peak Plot

> Dataset: GSE100400 - SUFU peak across samples

Peak Plot

> Dataset: GSE131257 - SUFU peak across samples

Peak Plot