HTLV1 Target gene Detail Information

> SYNPO2 Gene Search Result


Gene Information
Gene Name SYNPO2
Gene ID 171024
Gene Full Name synaptopodin 2
Gene Alias SYISL
Transcripts ENSG00000172403
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles, Actin filaments;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9UMS6
HGNC ID HGNC:17732
OMIM ID 620941
Summary Enables alpha-actinin binding activity and filamin binding activity. Involved in positive regulation of actin filament bundle assembly; positive regulation of cell migration; and regulation of Rho-dependent protein serine/threonine kinase activity. Located in several cellular components, including Z disc; focal adhesion; and stress fiber. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SYNPO2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008013 chr4 6 32 11 49 View
6032707 chr4 0 0 0 0 View

Target gene [SYNPO2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SYNPO2 peak across samples

Peak Plot