HTLV1 Target gene Detail Information

> SYS1-DBNDD2 Gene Search Result


Gene Information
Gene Name SYS1-DBNDD2
Gene ID 767557
Gene Full Name SYS1-DBNDD2 readthrough (NMD candidate)
Gene Alias C20orf169-DBNDD2
Transcripts ENSG00000254806
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:33535
Summary This locus represents naturally occurring read-through transcription from the neighboring SYS1 Golgi-localized integral membrane protein homolog and dysbindin domain containing 2 (DBNDD2) genes. The read-through transcript includes the majority of exons from each individual gene, but it would be subject to nonsense-mediated mRNA decay (NMD) and is therefore predicted to be non-coding. [provided by RefSeq, Oct 2010]
Target gene [SYS1-DBNDD2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6016624 chr20 12 0 0 12 View

Target gene [SYS1-DBNDD2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SYS1-DBNDD2 peak across samples

Peak Plot