HTLV1 Target gene Detail Information

> THSD7A Gene Search Result


Gene Information
Gene Name THSD7A
Gene ID 221981
Gene Full Name thrombospondin type 1 domain containing 7A
Gene Alias -
Transcripts ENSG00000005108
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted to blood;
Membrane Info Disease related genes, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID Q9UPZ6
HGNC ID HGNC:22207
OMIM ID 612249
Summary The protein encoded by this gene is found almost exclusively in endothelial cells from placenta and umbilical cord. The encoded protein appears to interact with alpha(V)beta(3) integrin and paxillin to inhibit endothelial cell migration and tube formation. This protein may be involved in cytoskeletal organization. Variations in this gene may be associated with low bone mineral density in osteoporosis. [provided by RefSeq, Aug 2010]
Target gene [THSD7A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006639 chr7 0 11 54 65 View
6014039 chr7 2 0 15 17 View
6018003 chr7 5 5 0 10 View
6019177 chr7 5 0 3 8 View
6029556 chr7 0 1 0 1 View

Target gene [THSD7A] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - THSD7A peak across samples

Peak Plot