HPV Target gene Detail Information

> TLCD3B Gene Search Result


Gene Information
Gene Name TLCD3B
Gene ID 83723
Gene Full Name TLC domain containing 3B
Gene Alias CORD22|FAM57B|FP1188
Transcripts ENSG00000149926
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q71RH2
HGNC ID HGNC:25295
OMIM ID 615175
Summary This gene encodes a transmembrane protein, which may be a likely target of peroxisome proliferator-activated receptor gamma (PPAR-gamma). The product of the orthologous gene in mouse is related to obesity. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]
Target gene [TLCD3B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000227 chr16 24 485 27 536 View
5010929 chr16 4 13 23 40 View

Target gene [TLCD3B] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - TLCD3B peak across samples

Peak Plot