HBV Target gene Detail Information

> TMEFF2 Gene Search Result


Gene Information
Gene Name TMEFF2
Gene ID 23671
Gene Full Name transmembrane protein with EGF like and two follistatin like domains 2
Gene Alias CT120.2|HPP1|TENB2|TPEF|TR|TR-2
Transcripts ENSG00000144339
Virus HBV
Gene Type protein-coding
HPA Location Info Secreted in male reproductive system;
Membrane Info Predicted membrane proteins, Predicted secreted proteins
Uniport_ID Q9UIK5
HGNC ID HGNC:11867
OMIM ID 605734
Summary This gene encodes a member of the tomoregulin family of transmembrane proteins. This protein has been shown to function as both an oncogene and a tumor suppressor depending on the cellular context and may regulate prostate cancer cell invasion. Multiple soluble forms of this protein have been identified that arise from both an alternative splice variant and ectodomain shedding. Additionally, this gene has been found to be hypermethylated in multiple cancer types. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2015]
Target gene [TMEFF2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013137 chr2 1 4 0 5 View
1016089 chr2 1 1 0 2 View
1021225 chr2 1 4 0 5 View

Target gene [TMEFF2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - TMEFF2 peak across samples

Peak Plot

> Dataset: GSE68402 - TMEFF2 peak across samples

Peak Plot

> Dataset: GSE270130 - TMEFF2 peak across samples

Peak Plot

> Dataset: GSE100400 - TMEFF2 peak across samples

Peak Plot

> Dataset: GSE131257 - TMEFF2 peak across samples

Peak Plot