HBV Target gene Detail Information

> TRIP13 Gene Search Result


Gene Information
Gene Name TRIP13
Gene ID 9319
Gene Full Name thyroid hormone receptor interactor 13
Gene Alias 16E1BP|MVA3|OOMD9|OZEMA9
Transcripts ENSG00000071539
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear speckles;Cytosol, Acrosome, Equatorial segment, Principal piece;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q15645
HGNC ID HGNC:12307
OMIM ID 604507
Summary This gene encodes a protein that interacts with thyroid hormone receptors, also known as hormone-dependent transcription factors. The gene product interacts specifically with the ligand binding domain. This gene is one of several that may play a role in early-stage non-small cell lung cancer. [provided by RefSeq, Oct 2009]
Target gene [TRIP13] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000437 chr5 1904 312 105 2321 View
1001110 chr5 600 407 45 1052 View
1022520 chr5 600 407 45 1052 View
1023410 chr5 1904 312 105 2321 View
1024148 chr5 27 692 581 1300 View
1042914 chr5 2532 401 114 3047 View
1042915 chr5 916 493 53 1462 View

Target gene [TRIP13] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660 		RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - TRIP13 expression across samples

Volcano Plot

Bar Plot

> Dataset: GSE94660 - TRIP13 expression across samples

Volcano Plot

Bar Plot