HBV Target gene Detail Information

> TRMT1L Gene Search Result


Gene Information
Gene Name TRMT1L
Gene ID 81627
Gene Full Name tRNA methyltransferase 1L
Gene Alias C1orf25|MST070|MSTP070|TRM1L|bG120K12.3
Transcripts ENSG00000121486
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID Q7Z2T5
HGNC ID HGNC:16782
OMIM ID 611673
Summary This gene encodes a protein that has some similarity to N2,N2-dimethylguanosine tRNA methyltransferase from other organisms. Studies of the mouse ortholog have shown that this protein plays a role in motor coordination and exploratory behavior, and it may also be involved in modulating postnatal neuronal functions. Alternatively spliced transcripts have been identified for this gene. [provided by RefSeq, Jan 2011]
Target gene [TRMT1L] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1040979 chr1 6 0 1 7 View
1040980 chr1 6 0 1 7 View
1040981 chr1 6 0 1 7 View
1040982 chr1 6 0 1 7 View
1040983 chr1 6 0 1 7 View
1040984 chr1 6 0 1 7 View

Target gene [TRMT1L] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - TRMT1L peak across samples

Peak Plot

> Dataset: GSE68402 - TRMT1L peak across samples

Peak Plot

> Dataset: GSE270130 - TRMT1L peak across samples

Peak Plot