HTLV1 Target gene Detail Information

> UFD1 Gene Search Result


Gene Information
Gene Name UFD1
Gene ID 7353
Gene Full Name ubiquitin recognition factor in ER associated degradation 1
Gene Alias UFD1L
Transcripts ENSG00000070010
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cytosol;Nucleoli;
Membrane Info Predicted intracellular proteins, Transporters
Uniport_ID Q92890
HGNC ID HGNC:12520
OMIM ID 601754
Summary The protein encoded by this gene forms a complex with two other proteins, nuclear protein localization-4 and valosin-containing protein, and this complex is necessary for the degradation of ubiquitinated proteins. In addition, this complex controls the disassembly of the mitotic spindle and the formation of a closed nuclear envelope after mitosis. Mutations in this gene have been associated with Catch 22 syndrome as well as cardiac and craniofacial defects. Alternative splicing results in multiple transcript variants encoding different isoforms. A related pseudogene has been identified on chromosome 18. [provided by RefSeq, Jun 2009]
Target gene [UFD1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6020387 chr22 6 1 0 7 View

Target gene [UFD1] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - UFD1 peak across samples

Peak Plot