HPV Target gene Detail Information

> VCF1 Gene Search Result


Gene Information
Gene Name VCF1
Gene ID 84923
Gene Full Name VCP nuclear cofactor family member 1
Gene Alias FAM104A
Transcripts ENSG00000133193
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q969W3
HGNC ID HGNC:25918
OMIM ID 621109
Target gene [VCF1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000198 chr17 297 339 18 654 View

Target gene [VCF1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - VCF1 peak across samples

Peak Plot

> Dataset: GSE143026 - VCF1 peak across samples

Peak Plot