HPV Target gene Detail Information

> VPS35L Gene Search Result


Gene Information
Gene Name VPS35L
Gene ID 57020
Gene Full Name VPS35 endosomal protein sorting factor like
Gene Alias C16orf62|EC97|RTSC3
Transcripts ENSG00000103544
Virus HPV
Gene Type protein-coding
HPA Location Info Mitochondria;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q7Z3J2
HGNC ID HGNC:24641
OMIM ID 618981
Summary Involved in Golgi to plasma membrane transport and endocytic recycling. Located in endosome. Implicated in Ritscher-Schinzel syndrome. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [VPS35L] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000243 chr16 422 31 7 460 View
5008981 chr16 21 2 0 23 View
5009422 chr16 31 16 3 50 View
5010517 chr16 3 0 0 3 View

Target gene [VPS35L] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - VPS35L peak across samples

Peak Plot

> Dataset: GSE143026 - VPS35L peak across samples

Peak Plot